NEW ZEALAND TARANAKI

Ideas for amateur research equipment

From Charles Carter

"The following is intended to help the amateur biochemist/geneticist put together a small laboratory de novo without spending much money. The cited articles can almost certainly be photocopied from your nearest university library. Unfortunately, I could not make them available on this site due to copyright restrictions. "

Microcentrifuge: Shawn Carlson was kind enough to feature my do-it-yourself centrifuge design in his January 1998 Amateur Scientist column in Scientific American.  My design uses a commonly available Osterizer blender and a PVC pipe cap for the rotor.  The article can be read in the on-line here: http://www.sciam.com/1998/0198issue/0198amsci.html.  An article describing how to use this centrifuge to isolate DNA can be found in: The Amateur Scientist: September 1998

Video-microscopy: If you've ever thought about hooking your microscope up to your camcorder without spending any money, my plans on how to do this will be featured in the October 1998 issue of Scientific American.  The article will be available on-line at http://www.sciam.com/1998/1098issue/1098amsci.html.

Electrophoresis Power Supplies: Plans for a controlled-current power supply can be found in the Journal of Chemical Education, Vol. 67, No. 8, Aug 1990. This supply features 0-90 mA dc, and common 120 V ac power. I would strongly advise you to price ALL of the parts before starting though. The 1600 ohm, 50W pot alone is worth over $50 in Canada. The same goes for the isolation transformer (which I decided to leave out). If I could do it all over again I would opt for the super-cheap circuit described in Vol. 63, No. 12, Dec 1986, of the same publication. If you're a real cheapskate like me you could even use a bunch of 9-V batteries in series.

Magnetic Stirrer: Journal of Chemical Education, Vol. 69, No. 5, May 1992, p 415(2). Anybody with a modicum of mechanical aptitude should be able to put one of these together with a little imagination.  You will need a 4" cylindrical magnet, a hot glue gun, a hobby motor, an old DC power pack (or battery), a 750ml cylindrical tupperware container, and a 100K potentiometer.

IBM Parallel Port Interface: Am. J. Phys., Vol. 57, No. 6, June 1989.  This article provides a schematic and plans for an inexpensive ADC (analog-to-digital circuit) that uses measures the resistance of an unknown resister and passes an 8 bit value to the parallel port. Unfortunately 8 bits doesn't give you much accuracy, and there are much simpler ways to interface.  When I wanted to interface my home-built UV spectrophotometer to my PC, I simply wired the photodiode (in reverse bias) directly to the pins of the joystick port, and it didn't cost me a nickle.

PCR in a Teacup: Why spent thousands of dollars on a thermocycler when all you really need is a 150-ml beaker (with in and out ports), water solenoid valves, 3 aquarium water heaters, and a few other inexpensive parts? Or better yet, why not just preheat 3 pans of water (to 92C, 54C, and 72C) and manually switch your reaction tube from one to the other?

Chromatography: If you want to do column or paper chromatography using only household materials and chemicals, see the Journal of Chemical Education, Vol. 69, No. 12, Dec 1992.   If you want to assemble a more sophisticated gel-filtration apparatus, see Vol. 70, No. 5, May 1993. For this one you'll need to buy gel for your bed from a biotech company.

PVC Photometer: Journal of Chemical Education, Vol. 73, No. 3, Mar 1996.  Complete plans are included for building a spectrophotometer out of plastic PVC piping and a radiometric light probe. They do, however, expect you to buy this lightprobe as well as its PC interphace box. I recommend that you simply buy E G & G Vactec's VTB6060UV or VTB6061UV photodiode and wire it directly to your PC gameport. This diode will actually detect light from 200nm to 1100 nm. If you don't know how to program your gameport interface, Email me.

Electrophoresis: I had a lot of articles on how to perform electrophoresis cheaply but I lent them all to friends and never saw them again!  My favourite described how to use a covered butter dish, a couple nails, and a chain of 9-V batteries.  Personally though I would buy some sheets of acrylic plastic from a plastics company and some plexiglass glue and build my own electrophoresis chamber.  Take measurements from one at school (if you're a student) or get the measurements from spec sheets on biotech supply company's web sites.  Glue all the parts together with the plexiglass glue then line all the inside joints with silicone.  Buy some carbon welders electrodes from the hardware store and use them in place of expensive/hard to find platinum wire.  Use 4 9V batteries in series as your power supply.  

pH Meter:See Journal of Chemical Education, Vol. 69, No. 7, Jul 1992 if you want to build your own, but it is far cheaper to buy a pocket digital pH meter from a biotech supplier. Make sure it can do 2 point calibrations. I use a Corning Chek-Mite pH sensor, model pS30. Corning phone number is (800)-222-7740 or (607)-974-4001 in Canada.

Water Bath: Journal of Chemical Education, Vol. 69, No. 7, Jul 1992, p. 568(2). You can adapt this circuit to regulate a home-built incubator, too.  If you are going to be maintaining temperatures between 20C and 40C (37.5 being very common in the lab), then I recommend you simply submerge a $15 adjustable aquarium heater into a large caserole dish.

Balance: Scientific American, June 1996.  This article yet shows you how to weigh in milligrams using an old guage from your multimeter or stereo.  It is very inexpensive to build and from what I've heard, it works really well.

Electroporator: BioTechniques 8:28-30, 1990.  An upgrade to this article can be found in BioTechniques 8:508 (for multi-samples).  Also, see Anal. Biochem 1987 Jun 163(2): 464-469. Last but not least, see BioTechniques 16(2):312-321 Feb 1994 for a large-scale model.

Pipetting: Adjustable micropipettes cost a fortune (> 300$), so I recommend buying disposable graduated glass capillaries (100ul, 10ul etc) and a Sigma brand plunger. If you want to build your own air-displacement pipettor, see Journal of Chemical Education, Vol. 68, No. 4, Apr 1991.  Alternatively you can use Hamilton Syringes which are availble for many different microliter-range quantities.

(Reproduced with permission)

 

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